jag protein (Bifidobacterium dentium) - STRING interaction network

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Score

jag

Jag protein. (181 aa)

Predicted Functional Partners:

yidC

0.947

BDP_0311

0.930

gidB

0.779

rne

0.712

rnpA

0.707

rplP

0.572

trpA

0.572

rplV

0.570

rpsE

0.568

rpsS

0.566

Your Current Organism:

Bifidobacterium dentium

NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BDP_0311	jag	BDP_0311	BDP_2275	Conserved hypothetical protein; Belongs to the UPF0109 family.	Jag protein.	0.930
BDP_0311	rne	BDP_0311	BDP_0344	Conserved hypothetical protein; Belongs to the UPF0109 family.	Rne Ribonuclease G.	0.666
gidB	jag	BDP_2274	BDP_2275	GidB Methyltransferase gidB (Glucose inhibited division protein B); Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.	Jag protein.	0.779
gidB	rnpA	BDP_2274	BDP_2277	GidB Methyltransferase gidB (Glucose inhibited division protein B); Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.	RnpA Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.630
gidB	yidC	BDP_2274	BDP_2276	GidB Methyltransferase gidB (Glucose inhibited division protein B); Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.	YidC Inner membrane protein (Preprotein translocase subunit YidC).	0.657
jag	BDP_0311	BDP_2275	BDP_0311	Jag protein.	Conserved hypothetical protein; Belongs to the UPF0109 family.	0.930
jag	gidB	BDP_2275	BDP_2274	Jag protein.	GidB Methyltransferase gidB (Glucose inhibited division protein B); Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.	0.779
jag	rne	BDP_2275	BDP_0344	Jag protein.	Rne Ribonuclease G.	0.712
jag	rnpA	BDP_2275	BDP_2277	Jag protein.	RnpA Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.707
jag	rplP	BDP_2275	BDP_0438	Jag protein.	rplP 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.572
jag	rplV	BDP_2275	BDP_0436	Jag protein.	rplV 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.570
jag	rpsE	BDP_2275	BDP_0448	Jag protein.	rpsE 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.568
jag	rpsS	BDP_2275	BDP_0434	Jag protein.	rpsS 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.566
jag	trpA	BDP_2275	BDP_1191	Jag protein.	TrpA Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.	0.572
jag	yidC	BDP_2275	BDP_2276	Jag protein.	YidC Inner membrane protein (Preprotein translocase subunit YidC).	0.947
rne	BDP_0311	BDP_0344	BDP_0311	Rne Ribonuclease G.	Conserved hypothetical protein; Belongs to the UPF0109 family.	0.666
rne	jag	BDP_0344	BDP_2275	Rne Ribonuclease G.	Jag protein.	0.712
rne	rnpA	BDP_0344	BDP_2277	Rne Ribonuclease G.	RnpA Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.566
rnpA	gidB	BDP_2277	BDP_2274	RnpA Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	GidB Methyltransferase gidB (Glucose inhibited division protein B); Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.	0.630
rnpA	jag	BDP_2277	BDP_2275	RnpA Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	Jag protein.	0.707