Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9Y2C2Uncharacterized protein; Belongs to the disease resistance NB-LRR family. (1427 aa)    
Predicted Functional Partners:
A0A0D9Z055
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
    
 0.510
A0A0D9YTU8
Uncharacterized protein.
  
     0.483
A0A0D9ZLE9
Uncharacterized protein.
  
     0.479
A0A0D9Y4F6
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  0.476
A0A0D9Y4I4
LEA_2 domain-containing protein.
  
     0.466
A0A0D9ZSR1
Uncharacterized protein.
      
 0.460
A0A0D9ZZR2
Uncharacterized protein.
      
 0.460
A0A0D9ZF71
Uncharacterized protein.
  
     0.453
A0A0D9YZ04
Uncharacterized protein.
  
 
   0.451
A0A0D9ZZY0
Uncharacterized protein.
  
     0.450
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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