STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9Y5K5Uncharacterized protein. (1057 aa)    
Predicted Functional Partners:
A0A0D9ZAX6
WD_REPEATS_REGION domain-containing protein.
    
 
 0.538
A0A0E0B8Z6
Chromo domain-containing protein.
      
 0.495
A0A0E0AXF0
VEFS-Box domain-containing protein.
      
 0.456
A0A0E0B155
VEFS-Box domain-containing protein.
      
 0.456
A0A0D9ZQ44
Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.
      
 0.440
A0A0D9YN41
B box-type domain-containing protein.
    
 
 0.438
A0A0E0ACT6
B box-type domain-containing protein.
    
 
 0.438
A0A0D9YG33
Uncharacterized protein.
      
 0.410
A0A0E0A163
RING-type domain-containing protein.
      
 0.410
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.