STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9Y931Uncharacterized protein. (361 aa)    
Predicted Functional Partners:
A0A0D9Y481
WD_REPEATS_REGION domain-containing protein.
   
 0.998
A0A0D9Y9M1
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.998
A0A0D9Z756
Uncharacterized protein.
   
 0.998
A0A0D9ZA86
Uncharacterized protein.
   
 0.998
A0A0E0AMD2
WD_REPEATS_REGION domain-containing protein.
   
 0.997
A0A0D9Z6V9
Bms1-type G domain-containing protein.
   
 
 0.996
A0A0D9ZCS2
WD_REPEATS_REGION domain-containing protein.
   
 0.996
A0A0E0BV18
WD_REPEATS_REGION domain-containing protein.
   
 0.996
A0A0D9YL15
Ribosomal_L6 domain-containing protein.
   
 
 0.995
A0A0D9ZPU4
CBF domain-containing protein.
   
 0.995
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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