STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9YDI3Uncharacterized protein. (396 aa)    
Predicted Functional Partners:
A0A0D9Z9B7
Uncharacterized protein.
  
     0.488
A0A0E0B740
PEROXIDASE_4 domain-containing protein.
  
     0.474
A0A0D9ZF53
Uncharacterized protein.
  
     0.473
A0A0D9ZE80
Phytocyanin domain-containing protein; Belongs to the multicopper oxidase family.
  
     0.461
A0A0D9Z328
TF-B3 domain-containing protein.
  
   
 0.457
A0A0D9YN65
Uncharacterized protein.
  
     0.454
A0A0E0ANA2
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
  
     0.453
A0A0D9Z5V7
Uncharacterized protein.
  
 
   0.451
A0A0E0AQH9
Copine domain-containing protein.
  
     0.451
A0A0D9Y422
BES1_N domain-containing protein.
  
     0.442
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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