STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9YE73Uncharacterized protein. (472 aa)    
Predicted Functional Partners:
A0A0E0BB95
Uncharacterized protein.
  
  
 
0.930
A0A0D9Z7B3
Uncharacterized protein.
  
 
 
0.877
A0A0D9Z208
Uncharacterized protein.
  
  
 
0.875
A0A0D9YF68
UmuC domain-containing protein.
    
 0.755
A0A0E0BTN9
Uncharacterized protein.
  
 
 
0.738
A0A0E0ADD6
Ubiquitin-like domain-containing protein.
    
 0.659
A0A0E0B4J6
Ubiquitin-like domain-containing protein.
    
 0.659
A0A0E0BC36
Ubiquitin-like domain-containing protein.
    
 0.659
A0A0D9ZPF7
AAA domain-containing protein.
     
 0.639
A0A0D9Z991
Uncharacterized protein.
    
 0.629
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.