STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9YGM5Uncharacterized protein. (409 aa)    
Predicted Functional Partners:
A0A0E0AA82
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
0.959
A0A0E0BA62
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.959
A0A0D9Y6L7
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.955
A0A0E0B9K6
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.955
A0A0D9Y4A3
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.947
A0A0D9ZUZ9
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.947
A0A0D9YND0
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.946
A0A0E0ACI2
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.946
A0A0D9Y3I6
DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.940
A0A0D9ZUM3
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.940
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.