STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9YHB7Uncharacterized protein. (68 aa)    
Predicted Functional Partners:
A0A0D9ZCJ4
Uncharacterized protein.
    
 0.876
A0A0E0AFV8
Uncharacterized protein.
   
 0.820
A0A0D9Z0R3
ERCC4 domain-containing protein.
    
 0.812
A0A0E0BCR8
HHH_2 domain-containing protein.
   
 0.809
A0A0E0BG20
Uncharacterized protein.
    
 0.782
A0A0D9YBL0
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.751
A0A0E0ABI9
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.751
A0A0D9YJZ4
ERCC4 domain-containing protein.
    
 0.742
A0A0D9YHP9
Uncharacterized protein.
   
 0.710
A0A0D9YRB4
Uncharacterized protein.
   
 0.710
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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