STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9YX82Rab-GAP TBC domain-containing protein. (677 aa)    
Predicted Functional Partners:
A0A0D9Y5I4
Uncharacterized protein.
   
 0.689
A0A0E0A1M2
Uncharacterized protein.
   
 0.689
A0A0E0A233
Uncharacterized protein.
   
 0.689
A0A0D9ZQX7
Autophagy-related protein.
   
 0.654
A0A0E0AKH1
Autophagy-related protein.
   
 0.654
A0A0E0ARS7
Autophagy-related protein.
   
 0.654
A0A0E0BEC1
Autophagy-related protein.
   
 0.654
A0A0D9YK34
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.
    
 0.638
A0A0D9Z7H8
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.
    
 0.638
A0A0E0ATF2
Uncharacterized protein.
    
 0.638
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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