STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9Z4A7Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1007 aa)    
Predicted Functional Partners:
A0A0D9Z060
Uncharacterized protein.
    
 0.599
A0A0D9ZW24
DNA helicase; Belongs to the MCM family.
    
 
 0.552
A0A0D9ZYR2
Uncharacterized protein.
    
 0.489
A0A0E0BG18
Uncharacterized protein.
    
 0.482
A0A0E0AG66
Sm domain-containing protein.
    
 0.461
A0A0D9YLN7
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.459
A0A0D9Z0H6
PSP domain-containing protein.
    
 0.435
A0A0D9Z611
Uncharacterized protein.
    
 0.434
A0A0D9Z6N9
Uncharacterized protein.
    
 0.434
A0A0D9YKI6
Small nuclear ribonucleoprotein Sm D2.
    
 0.425
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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