STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9Z5D7Uncharacterized protein. (536 aa)    
Predicted Functional Partners:
A0A0D9Z806
Uncharacterized protein.
  
 
  0.601
A0A0D9YHK9
Glycos_transf_N domain-containing protein.
    
  0.596
A0A0E0AJD2
Uncharacterized protein.
  
 
  0.584
A0A0D9ZSN9
OVATE domain-containing protein.
  
  0.581
A0A0E0BDM3
Uncharacterized protein.
  
 
  0.580
A0A0D9YKS7
Uncharacterized protein.
  
 
  0.576
A0A0D9YSE4
Uncharacterized protein.
  
 
  0.569
A0A0D9Z8E5
PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.
  
 
  0.559
A0A0E0B4C5
FAS1 domain-containing protein.
  
 
  0.555
A0A0D9ZQZ2
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.554
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.