STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9ZGS4Uncharacterized protein. (261 aa)    
Predicted Functional Partners:
A0A0E0AST3
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 
 0.739
A0A0D9Y617
Uncharacterized protein.
    
 0.659
A0A0D9ZWJ4
Uncharacterized protein.
    
 0.659
A0A0E0BPW3
Uncharacterized protein.
    
 0.659
A0A0E0BPW5
Uncharacterized protein.
    
 0.659
A0A0D9Y5K7
Uncharacterized protein.
    
 0.646
A0A0D9YLG5
Uncharacterized protein.
    
 0.646
A0A0D9YR30
Uncharacterized protein.
    
 0.646
A0A0D9YY36
Uncharacterized protein.
    
 0.646
A0A0D9Z0P8
Uncharacterized protein.
    
 0.646
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.