STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9ZM71LRRNT_2 domain-containing protein. (1076 aa)    
Predicted Functional Partners:
A0A0D9ZYR2
Uncharacterized protein.
    
 0.489
A0A0E0AS19
Uncharacterized protein.
  
 
  0.484
A0A0E0AWI9
Uncharacterized protein.
    
 0.484
A0A0E0B3W6
Uncharacterized protein.
    
 0.484
A0A0E0BG18
Uncharacterized protein.
    
 0.482
A0A0D9ZLM7
Uncharacterized protein.
    
 0.481
A0A0D9ZRD9
Uncharacterized protein.
    
 0.481
A0A0E0AG66
Sm domain-containing protein.
    
 0.461
A0A0D9YLN7
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.459
A0A0D9ZGP1
Uncharacterized protein.
  
 
  0.445
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.