STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9ZQH4Uncharacterized protein. (267 aa)    
Predicted Functional Partners:
A0A0D9ZGA7
Uncharacterized protein; Belongs to the arginase family.
     
 0.649
A0A0D9YDT0
Uncharacterized protein.
  
  
 0.548
A0A0E0BCT1
Trehalase.
   
  
 0.472
A0A0D9YLB2
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.466
A0A0D9Z1N1
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.466
A0A0E0AEN0
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.466
A0A0E0BIU4
Uncharacterized protein; Belongs to the plant dehydrin family.
  
 
 0.461
A0A0E0BIU3
Uncharacterized protein; Belongs to the plant dehydrin family.
  
 
 0.454
A0A0D9ZMD7
Malate synthase; Belongs to the malate synthase family.
   
  
 0.433
A0A0D9YT59
Poly [ADP-ribose] polymerase.
   
  
 0.424
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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