STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9ZQS1BHLH domain-containing protein. (223 aa)    
Predicted Functional Partners:
A0A0D9ZC93
GRAS domain-containing protein; Belongs to the GRAS family.
    
 0.906
A0A0D9YCE4
GRAS domain-containing protein; Belongs to the GRAS family.
    
 0.905
A0A0E0A348
GRAS domain-containing protein; Belongs to the GRAS family.
    
 0.905
A0A0D9ZTY8
BHLH domain-containing protein.
  
 
0.761
A0A0D9Y6Z4
BHLH domain-containing protein.
    
0.743
A0A0E0BUU9
BHLH domain-containing protein.
   
 0.617
A0A0D9ZDY9
BHLH domain-containing protein.
  
0.616
A0A0D9YYV2
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 
 0.574
A0A0D9YZ03
Uncharacterized protein.
    
 0.559
A0A0D9Z692
Uncharacterized protein.
    
 
 0.545
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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