STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D9ZVE4Uncharacterized protein. (490 aa)    
Predicted Functional Partners:
A0A0D9Y9V2
Uncharacterized protein.
  
 
   0.539
A0A0D9ZPR1
Uncharacterized protein.
  
     0.539
A0A0E0BGE7
Uncharacterized protein.
  
     0.539
A0A0E0BGC8
F-box domain-containing protein.
  
     0.538
A0A0D9ZA78
F-box domain-containing protein.
  
     0.536
A0A0E0AI37
F-box domain-containing protein.
  
     0.536
A0A0E0B1A7
Uncharacterized protein; Belongs to the disease resistance NB-LRR family.
  
     0.535
A0A0D9YLE3
Uncharacterized protein; Belongs to the disease resistance NB-LRR family.
  
     0.533
A0A0D9ZLC6
F-box domain-containing protein.
  
     0.533
A0A0E0B210
Uncharacterized protein.
  
 
   0.532
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.