STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0A3F9SET domain-containing protein. (500 aa)    
Predicted Functional Partners:
A0A0D9YFH6
Uncharacterized protein.
   
 0.891
A0A0D9YIS1
S1 motif domain-containing protein.
  
 0.878
A0A0D9ZAC0
PfkB domain-containing protein.
   
 0.837
A0A0E0BBD3
SAP domain-containing protein.
   
 
 0.833
A0A0D9ZF54
Smr domain-containing protein.
   
 
 0.767
A0A0D9ZI39
VOC domain-containing protein.
   
 
 0.707
A0A0D9ZWV9
VOC domain-containing protein.
   
 
 0.707
A0A0E0AE98
MINDY_DUB domain-containing protein.
    
 0.672
A0A0E0AEG3
Uncharacterized protein.
    
 0.672
A0A0E0AXY5
MINDY_DUB domain-containing protein.
    
 0.672
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.