STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0A4J1Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family. (451 aa)    
Predicted Functional Partners:
A0A0E0AQL2
Uncharacterized protein; Belongs to the actin family.
    
 0.852
A0A0D9ZJV6
SWIB domain-containing protein.
    
 0.851
A0A0E0AMJ6
BAF250_C domain-containing protein.
    
 0.777
A0A0D9YXL3
Uncharacterized protein.
    
 0.767
A0A0D9ZD96
Uncharacterized protein.
    
 0.767
A0A0E0B5Z9
Uncharacterized protein.
   
 
 0.711
A0A0D9YS43
Uncharacterized protein.
   
 
 0.703
A0A0D9YIB3
Uncharacterized protein.
    
 0.688
A0A0D9ZZB7
Uncharacterized protein.
    
 0.688
A0A0E0BRK6
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
   
 0.616
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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