STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0A6G7Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (537 aa)    
Predicted Functional Partners:
PSD2
Phosphatidylserine decarboxylase 2 alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type II sub-subfamily.
     
 0.962
A0A0D9Z0S7
Uncharacterized protein.
     
 0.962
A0A0E0A0C4
LNS2 domain-containing protein.
     
 0.959
A0A0E0BL66
LNS2 domain-containing protein.
     
 0.959
A0A0D9ZF76
Uncharacterized protein.
    
 0.950
A0A0D9ZFX9
Uncharacterized protein.
    
 0.942
A0A0E0BKU5
Uncharacterized protein.
    
 0.942
A0A0D9Y310
acidPPc domain-containing protein.
    
 0.941
A0A0D9YCV1
acidPPc domain-containing protein.
    
 0.941
A0A0D9YDI2
acidPPc domain-containing protein.
    
 0.941
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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