STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0A6Y0Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
A0A0E0BH76
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
   0.749
A0A0D9Y971
Uncharacterized protein.
    
 
 0.671
A0A0E0A2Q6
Uncharacterized protein.
   
 
 0.640
A0A0E0AT91
Uncharacterized protein.
    
 
 0.631
A0A0D9YXX7
Glutamine synthetase.
   
 
 0.629
A0A0D9Z457
Glutamine synthetase.
   
 
 0.629
A0A0D9ZCE5
Glutamine synthetase.
   
 
 0.629
A0A0D9ZRV9
Glutamine synthetase.
   
 
 0.629
A0A0E0BB93
Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.
   
 
 0.629
A0A0E0AJY3
PsbP domain-containing protein.
    
 
 0.624
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.