STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0A8T5Uncharacterized protein. (269 aa)    
Predicted Functional Partners:
A0A0D9Y5K7
Uncharacterized protein.
   
 0.904
A0A0D9YLG5
Uncharacterized protein.
   
 0.904
A0A0D9YR30
Uncharacterized protein.
   
 0.904
A0A0D9YY36
Uncharacterized protein.
   
 0.904
A0A0D9Z0P8
Uncharacterized protein.
   
 0.904
A0A0E0A1J6
Uncharacterized protein.
   
 0.904
A0A0E0A783
Uncharacterized protein.
   
 0.904
A0A0D9YQG5
Uncharacterized protein.
   
 
 0.884
A0A0D9YU83
Uncharacterized protein.
   
 0.735
A0A0D9ZLZ2
Uncharacterized protein.
   
 0.735
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.