STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0ADZ0Uncharacterized protein. (649 aa)    
Predicted Functional Partners:
A0A0D9YFR4
RRM domain-containing protein.
   
 
 0.857
A0A0D9YUV5
RRM domain-containing protein.
    
 
 0.454
A0A0E0AF42
Sister chromatid cohesion protein.
   
    0.441
A0A0D9YVB6
Uncharacterized protein.
   
 0.436
A0A0D9ZN81
MIF4G domain-containing protein.
   
 0.436
A0A0E0AK54
Helicase ATP-binding domain-containing protein.
    
 0.419
A0A0D9ZCU8
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
  0.409
A0A0D9ZW21
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 
  0.409
A0A0E0AQ44
Uncharacterized protein.
   
 
  0.409
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.