STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0AHW7Uncharacterized protein; Belongs to the argonaute family. (981 aa)    
Predicted Functional Partners:
A0A0D9YKG3
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.839
A0A0D9YME6
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.839
A0A0D9ZA03
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
   
 0.750
A0A0D9Z1C5
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
   
 0.745
A0A0D9YIX9
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
   
 0.718
A0A0E0AQS5
Uncharacterized protein.
   
 0.718
A0A0E0BBX6
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
   
 0.718
A0A0D9ZN12
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
   
 0.688
A0A0E0B2Y8
DRBM domain-containing protein.
   
 0.688
A0A0D9ZPI1
RPOLA_N domain-containing protein.
    
 0.660
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
Server load: low (16%) [HD]