Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0D9Y8J6 | A0A0D9YUV5 | RRM domain-containing protein. | RRM domain-containing protein. | 0.463 |
A0A0D9Y8J6 | A0A0E0A7J7 | RRM domain-containing protein. | RRM domain-containing protein. | 0.679 |
A0A0D9Y8J6 | A0A0E0AMN4 | RRM domain-containing protein. | Uncharacterized protein. | 0.599 |
A0A0D9YKM4 | A0A0D9YUV5 | Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. | RRM domain-containing protein. | 0.624 |
A0A0D9YKM4 | A0A0D9Z790 | Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. | MIF4G domain-containing protein. | 0.896 |
A0A0D9YKM4 | A0A0E0AMN4 | Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. | Uncharacterized protein. | 0.646 |
A0A0D9YQ66 | A0A0D9YUV5 | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | RRM domain-containing protein. | 0.973 |
A0A0D9YQ66 | A0A0D9Z790 | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | MIF4G domain-containing protein. | 0.979 |
A0A0D9YQ66 | A0A0E0A7J7 | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | RRM domain-containing protein. | 0.880 |
A0A0D9YQ66 | A0A0E0AMN4 | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | Uncharacterized protein. | 0.617 |
A0A0D9YUV5 | A0A0D9Y8J6 | RRM domain-containing protein. | RRM domain-containing protein. | 0.463 |
A0A0D9YUV5 | A0A0D9YKM4 | RRM domain-containing protein. | Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. | 0.624 |
A0A0D9YUV5 | A0A0D9YQ66 | RRM domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.973 |
A0A0D9YUV5 | A0A0D9YYG0 | RRM domain-containing protein. | RRM domain-containing protein. | 0.905 |
A0A0D9YUV5 | A0A0D9Z790 | RRM domain-containing protein. | MIF4G domain-containing protein. | 0.999 |
A0A0D9YUV5 | A0A0E0A7J7 | RRM domain-containing protein. | RRM domain-containing protein. | 0.901 |
A0A0D9YUV5 | A0A0E0AII2 | RRM domain-containing protein. | RRM domain-containing protein. | 0.463 |
A0A0D9YUV5 | A0A0E0AMN4 | RRM domain-containing protein. | Uncharacterized protein. | 0.671 |
A0A0D9YUV5 | A0A0E0AMN7 | RRM domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.685 |
A0A0D9YUV5 | A0A0E0BUZ3 | RRM domain-containing protein. | Uncharacterized protein. | 0.750 |
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