STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0ATK6Hydrolase_4 domain-containing protein. (329 aa)    
Predicted Functional Partners:
A0A0E0ANH6
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
  
 
 0.839
A0A0E0AME6
Complex1_49kDa domain-containing protein.
   
 
 0.810
A0A0E0ALZ9
Uncharacterized protein.
   
   0.805
A0A0D9ZCF2
Uncharacterized protein.
   
 
 0.782
A0A0D9ZCF3
Uncharacterized protein.
   
 
 0.782
A0A0E0BE93
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 
 0.771
A0A0D9Z5W9
CHCH domain-containing protein.
   
 
 0.762
A0A0D9Z3A6
Uncharacterized protein.
    
   0.741
A0A0D9ZIU6
L51_S25_CI-B8 domain-containing protein.
   
 
 0.720
A0A0D9Y430
Uncharacterized protein.
   
   0.718
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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