A0A0E0ATW3 protein (Oryza glumipatula) - STRING interaction network

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Score

A0A0E0ATW3

Uncharacterized protein. (350 aa)

Predicted Functional Partners:

A0A0D9Z790

0.713

A0A0E0AMW6

0.698

A0A0D9Z896

0.697

A0A0E0AWV4

0.680

A0A0D9YUV5

0.671

A0A0E0BFZ4

0.640

A0A0D9YYG0

0.626

A0A0E0A6W5

0.619

A0A0D9Y8J6

0.617

A0A0D9YQ66

0.617

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9Y8J6	A0A0D9YUV5	RRM domain-containing protein.	RRM domain-containing protein.	0.463
A0A0D9Y8J6	A0A0D9Z896	RRM domain-containing protein.	RRM domain-containing protein.	0.611
A0A0D9Y8J6	A0A0E0AMW6	RRM domain-containing protein.	RRM domain-containing protein.	0.606
A0A0D9Y8J6	A0A0E0ATW3	RRM domain-containing protein.	Uncharacterized protein.	0.617
A0A0D9Y8J6	A0A0E0AWV4	RRM domain-containing protein.	RRM domain-containing protein.	0.595
A0A0D9Y8J6	A0A0E0BFZ4	RRM domain-containing protein.	RRM domain-containing protein.	0.678
A0A0D9YQ66	A0A0D9YUV5	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	RRM domain-containing protein.	0.973
A0A0D9YQ66	A0A0D9Z790	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	MIF4G domain-containing protein.	0.979
A0A0D9YQ66	A0A0D9Z896	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	RRM domain-containing protein.	0.448
A0A0D9YQ66	A0A0E0AMW6	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	RRM domain-containing protein.	0.448
A0A0D9YQ66	A0A0E0ATW3	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	Uncharacterized protein.	0.617
A0A0D9YQ66	A0A0E0AWV4	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	RRM domain-containing protein.	0.448
A0A0D9YQ66	A0A0E0BFZ4	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	RRM domain-containing protein.	0.880
A0A0D9YUV5	A0A0D9Y8J6	RRM domain-containing protein.	RRM domain-containing protein.	0.463
A0A0D9YUV5	A0A0D9YQ66	RRM domain-containing protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.973
A0A0D9YUV5	A0A0D9YYG0	RRM domain-containing protein.	RRM domain-containing protein.	0.905
A0A0D9YUV5	A0A0D9Z790	RRM domain-containing protein.	MIF4G domain-containing protein.	0.999
A0A0D9YUV5	A0A0D9Z896	RRM domain-containing protein.	RRM domain-containing protein.	0.786
A0A0D9YUV5	A0A0E0A6W5	RRM domain-containing protein.	RRM domain-containing protein.	0.905
A0A0D9YUV5	A0A0E0AMW6	RRM domain-containing protein.	RRM domain-containing protein.	0.786