STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0B0P8Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
A0A0E0ABE2
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
0.902
A0A0D9Y6S8
Uncharacterized protein.
    
 
 0.873
A0A0D9ZLQ8
Uncharacterized protein.
    
 
 0.873
A0A0D9ZV23
Uncharacterized protein.
    
 
 0.873
A0A0D9Z6F8
Uncharacterized protein.
   
 
 0.845
A0A0D9Z534
Uncharacterized protein.
    
  0.814
A0A0D9YJD8
Uncharacterized protein.
   
  0.813
A0A0D9Z5M3
Uncharacterized protein.
   
 
 0.810
A0A0D9YM18
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.807
A0A0D9YV61
Ribosomal_L16 domain-containing protein.
    
 
 0.807
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.