STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0B3I3Uncharacterized protein; Belongs to the peptidase C1 family. (366 aa)    
Predicted Functional Partners:
A0A0E0AIA3
Uncharacterized protein.
    
  0.864
A0A0D9Y835
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.530
A0A0E0A1E3
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.516
A0A0D9YVM1
Uncharacterized protein.
   
 
 0.511
A0A0D9ZNL1
Uncharacterized protein.
   
 
 0.511
A0A0D9ZRN4
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.509
A0A0D9ZS82
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.506
A0A0D9ZS79
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.503
A0A0D9ZTF9
Beta-hexosaminidase.
    
 0.495
THI1
Thiamine thiazole synthase, chloroplastic; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; B [...]
      
 0.495
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.