STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0B3N9F-box domain-containing protein. (886 aa)    
Predicted Functional Partners:
A0A0D9Z139
AP-2 complex subunit alpha; Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome.
   
 0.740
A0A0D9Z1M0
Uncharacterized protein.
    
 0.673
A0A0E0AEP5
Uncharacterized protein.
    
 0.673
A0A0D9YWP9
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.669
A0A0D9YXR8
Rhodanese domain-containing protein.
    
 0.669
A0A0E0BEE4
Uncharacterized protein.
    
 0.621
A0A0E0BML2
Uncharacterized protein.
    
 0.621
A0A0E0BMM1
Clathrin-link domain-containing protein.
    
 0.621
A0A0E0BMM2
Uncharacterized protein.
    
 0.621
A0A0E0ADD6
Ubiquitin-like domain-containing protein.
    
  0.619
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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