STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0BA07Tify domain-containing protein. (174 aa)    
Predicted Functional Partners:
A0A0E0BE49
BHLH domain-containing protein.
   
 0.981
A0A0E0A014
Uncharacterized protein.
    
 0.946
A0A0D9Z535
Uncharacterized protein.
    
 0.777
A0A0D9ZCX0
BHLH domain-containing protein.
      
 0.750
A0A0E0AVK8
Tify domain-containing protein.
  
 
 0.668
A0A0D9YJF9
Uncharacterized protein.
   
 0.667
A0A0D9ZK52
Uncharacterized protein.
   
 0.667
A0A0E0A348
GRAS domain-containing protein; Belongs to the GRAS family.
  
 
 0.649
A0A0E0ANH6
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
    
  0.647
A0A0E0BGH5
Uncharacterized protein.
 
 
 0.640
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.