STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0BBE4WD_REPEATS_REGION domain-containing protein. (927 aa)    
Predicted Functional Partners:
A0A0E0AKD1
Uncharacterized protein.
 
  
 0.967
A0A0E0BFD6
Purple acid phosphatase.
   
 0.957
A0A0E0BQZ1
MI domain-containing protein.
   
 0.957
A0A0E0AYX5
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.943
A0A0D9YR99
WD_REPEATS_REGION domain-containing protein.
   
  0.941
A0A0D9Z8I7
WD_REPEATS_REGION domain-containing protein.
   
 
0.941
A0A0E0AX67
Cir_N domain-containing protein.
    
  0.940
A0A0D9Y668
Uncharacterized protein.
   
 0.898
A0A0E0AJM1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.898
A0A0E0AYV8
PPIase cyclophilin-type domain-containing protein.
   
 0.898
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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