STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0BDF3Uncharacterized protein. (1447 aa)    
Predicted Functional Partners:
A0A0E0BSC1
Translocase of chloroplast; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis.
  
 
 
0.849
A0A0E0BN09
WRKY domain-containing protein.
  
 
 
 0.800
A0A0E0BN08
Bac_surface_Ag domain-containing protein.
  
 
 
 0.790
A0A0D9Z589
Bac_surface_Ag domain-containing protein.
  
 
 
 0.775
A0A0D9ZX99
Uncharacterized protein.
    
 
 0.711
A0A0E0BN10
Uncharacterized protein.
    
 
 0.711
A0A0E0AGL7
Uncharacterized protein.
    
   0.669
A0A0E0AT91
Uncharacterized protein.
    
 0.533
A0A0E0BBF5
Uncharacterized protein.
   
   0.506
A0A0E0BU72
Ribosomal_L2_C domain-containing protein.
   
 
 0.480
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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