STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0BIZ1Uncharacterized protein. (127 aa)    
Predicted Functional Partners:
A0A0E0BE28
Uncharacterized protein.
    
 0.864
A0A0E0BHW7
PHD-type domain-containing protein.
    
 0.864
A0A0E0BS08
PHD-type domain-containing protein.
    
 0.864
A0A0D9YLE9
Peptidase_M14 domain-containing protein.
   
 0.829
A0A0D9ZVX5
Uncharacterized protein.
   
 0.829
A0A0D9YRH9
HAUS6_N domain-containing protein.
    
 0.823
A0A0E0A7S1
Uncharacterized protein.
   
 0.796
A0A0E0B545
DUF667 domain-containing protein.
    
 
 0.765
A0A0D9Z478
GLOBIN domain-containing protein; Belongs to the globin family.
   
 0.754
A0A0D9Z4F0
Uncharacterized protein; Belongs to the globin family.
   
 0.754
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.