STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0BK68Uncharacterized protein. (409 aa)    
Predicted Functional Partners:
A0A0D9YF42
TCP domain-containing protein.
  
 
 
 0.540
A0A0E0BIN0
BHLH domain-containing protein.
  
     0.528
A0A0D9Z953
SANT domain-containing protein.
  
     0.516
A0A0D9ZCQ3
Uncharacterized protein.
    
 
 0.508
A0A0E0AUV4
Uncharacterized protein.
  
     0.502
A0A0D9YPJ6
POX domain-containing protein.
  
 
   0.501
A0A0E0AVN2
BAH domain-containing protein.
  
     0.501
A0A0E0BJA8
SBP-type domain-containing protein.
  
     0.497
A0A0D9ZMV5
Uncharacterized protein.
  
     0.494
A0A0E0BUG8
Uncharacterized protein.
  
     0.494
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.