STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0BTH0Uncharacterized protein. (514 aa)    
Predicted Functional Partners:
A0A0E0BCL1
Uncharacterized protein.
  
 
 
 0.596
A0A0D9ZSY5
Uncharacterized protein.
  
 
   0.483
A0A0E0AKK6
Uncharacterized protein.
    
 
 0.481
A0A0E0B2F0
Uncharacterized protein.
  
     0.479
A0A0D9ZFX6
Uncharacterized protein.
  
 
   0.475
A0A0D9ZFX2
Uncharacterized protein.
  
     0.472
A0A0E0A8L9
CRM domain-containing protein.
    
 
 0.470
A0A0D9YT30
Uncharacterized protein.
  
     0.460
A0A0E0AVF6
Uncharacterized protein.
  
     0.453
A0A0E0AUM7
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
  
 0.452
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.