STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0BXT3Uncharacterized protein. (240 aa)    
Predicted Functional Partners:
PURA-2
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the adenylosuccinate synthetase family.
   
 0.909
A0A0E0FBA6
Uncharacterized protein.
   
 0.824
A0A0E0C649
Sde2_N_Ubi domain-containing protein.
   
 0.791
A0A0E0EAK9
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.773
A0A0E0C230
CP-type G domain-containing protein.
  
 0.765
A0A0E0DRS1
G domain-containing protein.
  
 0.765
A0A0E0CF55
Uncharacterized protein.
   
 0.757
A0A0E0ELN2
FoP_duplication domain-containing protein.
   
 0.755
A0A0E0ELN9
RPOLD domain-containing protein.
  
 0.751
A0A0E0E3V1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.747
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.