STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0BYY9Uncharacterized protein. (110 aa)    
Predicted Functional Partners:
A0A0E0DP28
Uncharacterized protein.
  
 
  0.494
A0A0E0E4Z3
Uncharacterized protein.
    
 0.472
A0A0E0CI95
Uncharacterized protein.
  
 
  0.471
A0A0E0FET2
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
  0.468
A0A0E0C415
Uncharacterized protein.
    
 0.462
A0A0E0E7V1
Small nuclear ribonucleoprotein-associated protein.
    
 0.461
A0A0E0ERW3
Uncharacterized protein.
  
 
  0.459
A0A0E0CZA5
Uncharacterized protein.
    
 0.456
A0A0E0CZW6
Uncharacterized protein.
    
 0.456
A0A0E0E2U6
Uncharacterized protein.
  
 
  0.455
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.