STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0C4K8Uncharacterized protein. (226 aa)    
Predicted Functional Partners:
rps11
30S ribosomal protein S11, chloroplastic; Belongs to the universal ribosomal protein uS11 family.
   
  0.875
A0A0E0E8W8
Uncharacterized protein.
    
 
 0.823
A0A0E0DCF3
Ribosomal_S3_C domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
  0.771
A0A0E0ELG5
DUF4413 domain-containing protein.
    
  0.758
A0A0E0E025
Uncharacterized protein.
   
 0.744
A0A0E0EZK0
Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.
   
   0.739
A0A0E0CDR4
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.721
A0A0E0C110
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
    
   0.720
A0A0E0C2T5
Uncharacterized protein.
    
   0.720
A0A0E0C8X4
Uncharacterized protein.
    
   0.720
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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