STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0C7D6Tr-type G domain-containing protein. (853 aa)    
Predicted Functional Partners:
A0A0E0EHH4
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.985
A0A0E0DS19
Ribos_L4_asso_C domain-containing protein.
  
 0.984
A0A0E0EMX3
Ribosomal_L2_C domain-containing protein.
 
 0.984
A0A0E0CBK0
Ribosomal_L18_c domain-containing protein.
  
 0.983
A0A0E0EW67
Ribosomal_S10 domain-containing protein.
  
 0.983
A0A0E0BWL9
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
  
 0.978
A0A0E0F8N9
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.975
A0A0E0F941
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.975
A0A0E0CCC9
Uncharacterized protein.
  
 
 0.968
A0A0E0CAL9
Uncharacterized protein.
  
 0.967
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.