STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CB80AB hydrolase-1 domain-containing protein. (402 aa)    
Predicted Functional Partners:
A0A0E0EHH3
Uncharacterized protein.
   
 0.922
A0A0E0CQH0
Aminotran_1_2 domain-containing protein.
    
 0.875
A0A0E0D5R3
Glutamine amidotransferase type-1 domain-containing protein.
    
 0.873
A0A0E0E2N9
Prephenate/arogenate dehydrogenase domain-containing protein.
    
  0.867
A0A0E0DVP6
Uncharacterized protein.
    
 0.738
A0A0E0D9R5
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.732
A0A0E0DVF4
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.718
A0A0E0CZP2
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.687
A0A0E0FAA9
E1_dh domain-containing protein.
  
 0.685
A0A0E0CRJ8
Uncharacterized protein.
    
 0.682
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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