STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CCC4Uncharacterized protein. (552 aa)    
Predicted Functional Partners:
A0A0E0EK97
Uncharacterized protein.
  
 0.819
A0A0E0EJ49
MGS domain-containing protein.
  
 
 0.752
A0A0E0CGE7
Uncharacterized protein.
  
 
 0.749
A0A0E0CGM3
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.727
A0A0E0D4N8
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.727
A0A0E0ESE2
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.727
A0A0E0EQ03
SnoaL-like domain-containing protein.
    
 0.708
A0A0E0D5R3
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.707
A0A0E0D075
Uncharacterized protein.
    
 0.702
A0A0E0CUD1
Protein kinase domain-containing protein.
    
 0.690
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.