STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CD20Uncharacterized protein. (218 aa)    
Predicted Functional Partners:
A0A0E0ELP6
Uncharacterized protein.
  
   
 0.592
A0A0E0F206
Uncharacterized protein.
  
     0.522
A0A0E0CZ99
Uncharacterized protein.
  
   
 0.506
A0A0E0DML3
Uncharacterized protein.
  
   
 0.494
A0A0E0CK68
Uncharacterized protein.
  
     0.474
A0A0E0F6B8
Uncharacterized protein.
  
     0.474
A0A0E0FC72
Uncharacterized protein.
  
     0.472
A0A0E0FC75
Uncharacterized protein.
  
     0.468
A0A0E0EKH4
Uncharacterized protein.
  
     0.465
A0A0E0F051
LysM domain-containing protein.
  
     0.465
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.