STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CD52NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family. (930 aa)    
Predicted Functional Partners:
A0A0E0D3J0
F-box domain-containing protein.
  
 
   0.510
A0A0E0CEA3
AvrRpt-cleavage domain-containing protein.
    
  0.505
A0A0E0D7B5
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.498
A0A0E0CH49
Uncharacterized protein.
  
 
  0.491
A0A0E0CT49
Uncharacterized protein.
  
 
  0.489
A0A0E0CP12
Uncharacterized protein.
  
 
   0.487
A0A0E0DEU9
F-box domain-containing protein.
  
 
   0.485
A0A0E0EKL7
FBD domain-containing protein.
  
   0.484
A0A0E0CCV1
DUF295 domain-containing protein.
  
  
  0.476
A0A0E0EYM9
ANK_REP_REGION domain-containing protein.
  
 
  0.475
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.