STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CD95Uncharacterized protein. (370 aa)    
Predicted Functional Partners:
A0A0E0C5T0
Uncharacterized protein.
   
 0.961
A0A0E0ETK4
Uncharacterized protein.
   
 0.961
A0A0E0DCR8
Uncharacterized protein.
   
 0.900
A0A0E0F8L9
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
     
 0.893
A0A0E0DDD4
Uncharacterized protein.
   
 
 0.889
A0A0E0CM04
Uncharacterized protein.
   
 0.881
A0A0E0CGJ9
Sm domain-containing protein.
   
 
 0.866
A0A0E0D8M5
RRM domain-containing protein.
   
 
 0.862
A0A0E0D231
Small nuclear ribonucleoprotein G.
   
 
 0.856
A0A0E0EM34
Splicing factor subunit; Belongs to the SF3B5 family.
   
 
 0.854
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.