STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CDU6Uncharacterized protein. (2233 aa)    
Predicted Functional Partners:
A0A0E0D6Y3
Uncharacterized protein.
    
 0.825
A0A0E0EHN6
Uncharacterized protein; Belongs to the actin family.
    
 0.821
A0A0E0DDC4
SWIB domain-containing protein.
    
 0.817
A0A0E0C8I5
Uncharacterized protein.
  
 
0.726
A0A0E0EBH7
Uncharacterized protein.
  
 
0.714
A0A0E0C410
Uncharacterized protein.
  
 
0.705
A0A0E0EGH0
Uncharacterized protein.
  
 
 0.668
A0A0E0CKA2
Uncharacterized protein.
   
 
 0.666
A0A0E0EUH9
Uncharacterized protein.
   
 
 0.666
A0A0E0CD16
Uncharacterized protein.
  
 
 0.659
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.