STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CES2Uncharacterized protein. (257 aa)    
Predicted Functional Partners:
A0A0E0C806
CAAD domain-containing protein.
  
    0.502
A0A0E0DU23
Uncharacterized protein.
  
    0.490
A0A0E0C1U7
TPR_REGION domain-containing protein.
    
 
 0.485
A0A0E0E3K9
Homeobox domain-containing protein.
  
     0.484
A0A0E0DLA1
Uncharacterized protein.
      
 0.461
A0A0E0CRU1
M16C_associated domain-containing protein.
    
 
 0.454
A0A0E0F6D1
Uncharacterized protein.
  
    0.448
A0A0E0D6S8
Uncharacterized protein.
   
  
 0.441
A0A0E0F440
Rieske domain-containing protein.
  
  
 0.422
A0A0E0CRL2
Uncharacterized protein.
  
     0.417
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.