STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CFX0Uncharacterized protein. (576 aa)    
Predicted Functional Partners:
A0A0E0EGL0
Uncharacterized protein.
  
     0.537
A0A0E0F5K2
Uncharacterized protein.
  
     0.529
A0A0E0CGV4
Uncharacterized protein.
  
     0.527
A0A0E0DVP7
Uncharacterized protein; Belongs to the glycosyltransferase 2 family.
  
     0.525
A0A0E0F125
Uncharacterized protein; Belongs to the glycosyltransferase 2 family.
  
     0.525
A0A0E0DDE3
Uncharacterized protein.
  
     0.518
A0A0E0E008
Uncharacterized protein.
  
    0.518
A0A0E0ET20
GRAM domain-containing protein.
  
     0.517
A0A0E0C5A1
Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
  
     0.516
A0A0E0E2H1
Cyclic nucleotide-binding domain-containing protein.
  
     0.514
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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