STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CIL7Uncharacterized protein. (446 aa)    
Predicted Functional Partners:
A0A0E0CUK7
Uncharacterized protein.
    
 0.737
A0A0E0F355
DNA polymerase.
   
 0.626
A0A0E0C6A7
Uncharacterized protein; Belongs to the ATP-dependent DNA ligase family.
     
 0.586
A0A0E0CWJ0
Uncharacterized protein.
    
 
 0.550
A0A0E0CUN4
Uncharacterized protein.
   
   0.510
A0A0E0CGP8
Epimerase domain-containing protein.
    
 
 0.503
A0A0E0D5M2
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
    
   0.503
A0A0E0CGJ9
Sm domain-containing protein.
    
  0.501
A0A0E0CEU5
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.497
A0A0E0DQ75
Uncharacterized protein.
    
 0.497
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.