STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CKM9TPR_REGION domain-containing protein. (925 aa)    
Predicted Functional Partners:
A0A0E0CGP1
Uncharacterized protein.
    
 0.900
A0A0E0EP11
Uncharacterized protein.
  
  
 
0.878
A0A0E0CC31
TPR_REGION domain-containing protein.
  
  
 
0.871
A0A0E0DNC6
AB hydrolase-1 domain-containing protein.
    
 0.823
A0A0E0EEP9
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.766
A0A0E0D8C5
FHA domain-containing protein.
     
 0.761
A0A0E0E8A5
FHA domain-containing protein.
     
 0.761
A0A0E0DXQ6
Uncharacterized protein.
     
 0.670
A0A0E0EA62
Uncharacterized protein.
     
 0.670
A0A0E0CB19
PHD domain-containing protein.
   
 0.646
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.