STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0CLT7HTH myb-type domain-containing protein. (728 aa)    
Predicted Functional Partners:
A0A0E0EDU0
Uncharacterized protein.
  
 
  0.528
A0A0E0EDC6
Uncharacterized protein.
    
 0.498
A0A0E0EDU1
Uncharacterized protein.
  
 
  0.492
A0A0E0CTC0
Uncharacterized protein.
  
 
  0.486
A0A0E0CA20
Uncharacterized protein.
  
 
  0.470
A0A0E0D792
Uncharacterized protein.
  
 
  0.466
A0A0E0DH99
C2H2-type domain-containing protein.
  
 
  0.456
A0A0E0EZ65
FHA domain-containing protein.
    
  0.444
A0A0E0EG97
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
  0.439
A0A0E0FAS2
Uncharacterized protein.
  
 
  0.439
Your Current Organism:
Oryza meridionalis
NCBI taxonomy Id: 40149
Other names: Australian wild rice, IRRI 101147, O. meridionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.